Phase I through Phase III clinical operations

Clinical Trial Management

Govern your clinical trial programme from protocol through last patient out

From protocol development through site activation, CRO oversight, clinical operations, and trial close-out — one governed, 21 CFR Part 11 and ICH E6(R2) GCP compliant platform replacing email chains with CROs and shared drives.

Dedicated pharma cloud    |  CRO & site oversight built-in | Purpose-built for clinical operations

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Governed clinical trial phases — protocol through trial close-out and archive

GCP

ICH E6 (R2) compliant records, e-signatures, and audit trail on every trial action

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Platform replacing email chains with CROs, site trackers, and shared drives
THE CHALLENGE

Clinical operations runs on email chains with CROs and spreadsheet site trackers — tools with no governed audit trail

Clinical trial operations involves sponsors, CROs, clinical sites, IRBs, and data management teams — all coordinating across email chains, shared drives, and individual spreadsheets. Site activation is tracked in Excel. Protocol amendments are managed by email. CRO deliverables have no governed oversight register. There is no single source of truth for trial status.

ICH E6(R2) requires sponsors to have systems that provide effective oversight of outsourced activities. Most clinical operations teams satisfy this requirement through policy documents and periodic review meetings — not through governed, real-time action tracking and a complete audit trail.

What goPLIMS replaces in your R&D workflow
  • Email chains to manage CRO deliverables and query responses
  • Spreadsheet site activation trackers manually updated by CRO
  • Shared drives for the Trial Master File with no version governance
  • Separate tools for protocol management, site tracking, and queries
  • Trial knowledge lost at programme close-out when CRO contract ends
goPLIMS closes the gap

A governed clinical operations platform that replaces email chains with CROs, spreadsheet site trackers, and shared drives — providing the real-time oversight, electronic records, and audit trail that ICH E6(R2) requires and regulatory inspectors expect.

Governed Workflow

End-to-end governance from protocol development through trial close-out

goPLIMS governs every phase of the clinical trial — from protocol authoring and regulatory submission through site activation, CRO management, data cleaning, and formal trial close-out.

Pharma-specific use cases

Real clinical trial scenarios governed by goPLIMS

From first-in-human Phase I to global Phase III pivotal trials — goPLIMS governs the clinical operations complexity that comes with managing multiple sites, CROs, and regulatory jurisdictions simultaneously.

Phase I · FIH

First-in-human Phase I trial — sponsor oversight of CRO across three investigator sites

A clinical-stage biotech sponsors a Phase I FIH trial using a CRO for site management and data collection. goPLIMS governs the sponsor’s oversight — CRO deliverable actions tracked in ActionR, site activation milestones in TrackR, protocol documents and IB in EDocM, and all CRO queries managed via RFI-M — giving the CMO real-time trial status without daily CRO calls.

Phase II · Multi-centre

Phase II multi-centre trial — managing CRO performance and site enrolment across 12 sites

A specialty pharma sponsor manages a 12-site Phase II efficacy study using goPLIMS for CRO oversight — each site’s activation and enrolment milestones visible on one TrackR dashboard, all CRO queries governed as RFIs, and protocol deviation CAPAs tracked in ActionR — giving the VP Clinical the programme status in one view, not twelve email threads.

Phase III · Pivotal

Phase III pivotal trial — managing parallel protocol amendments across FDA, EMA, and Health Canada

A Phase III global pivotal trial requires a protocol amendment following a DSMB recommendation. goPLIMS governs the amendment across all three regulatory jurisdictions simultaneously — amendment document in EDocM with version control, regulatory submissions tracked as actions per market, IRB approvals recorded, and site implementation actions assigned and tracked — all on one platform.

Programme transition

Capturing Phase II trial lessons to inform Phase III protocol design

After Phase II results, the clinical team uses goPLIMS DecisionM to capture lessons learned — patient selection criteria performance, endpoint sensitivity findings, site performance patterns — and feeds these directly into Phase III protocol decisions. The Phase III team has a searchable record of Phase II learnings before first protocol draft, avoiding repeated mistakes and documenting the rationale for Phase III design choices in the regulatory submission package.

Platform modules

The goPLIMS modules powering clinical trial management

Six purpose-built modules working together on one dedicated, 21 CFR Part 11 and ICH E6(R2) GCP compliant cloud — governing every stage of the clinical trial from protocol through close-out.

ActionR

Action Management

Assign, track, and escalate every site activation action, CRO deliverable, and trial operational milestone — with owner accountability, deadline management, and real-time status across all sites and vendors simultaneously.

EDocM

Electronic Document Management

A governed Trial Master File repository — protocols, IBs, ICFs, site correspondence, and CSR — version-controlled, searchable, and linked to approval workflows. The TMF is inspection-ready at any point during the trial.

ESignM

Electronic Signature Management

21 CFR Part 11 and ICH E6(R2) compliant electronic signatures on every protocol, amendment, and CSR approval — timestamped, tamper-evident, and exportable as part of the regulatory submission package.

DecisionM

Decision Management

Capture every trial design decision — dose selection, endpoint choices, patient selection criteria — with rationale and alternatives. The clinical development decision record that feeds the clinical summary sections of the regulatory submission dossier.

TrackR

Central Online Tracker

A live trial dashboard — site activation status, enrolment progress, CRO deliverable completion, and open actions — updated in real time as actions are completed and milestones reached across all sites and vendors.

RFI-M

RFI Management

Govern CRO queries, site queries, and sponsor-to-CRO information requests as formal RFIs — with response deadlines, review and approval before issuing, and a complete audit trail meeting ICH E6(R2) oversight requirements.

Data Integrity & Security

GCP-compliant clinical trial records — from protocol to archive

Every protocol, amendment, CRO query, and close-out record in goPLIMS meets the data integrity and security requirements that FDA, EMA, and Health Canada apply when reviewing the Trial Master File or inspecting clinical operations.

 

21 CFR Part 11 and GCP compliant e-signatures

Protocol approvals, amendment sign-offs, and CSR approvals are signed with timestamped, intent-captured electronic signatures meeting FDA 21 CFR Part 11 and ICH E6(R2) requirements for electronic records in clinical trials.

Tamper-evident TMF audit trail

Every document creation, version update, and approval action in the Trial Master File is captured in an immutable, timestamped audit trail — so inspectors can trace the complete history of every TMF record from first draft through archive.

Role-based access — sponsor, CRO, site

Sponsor teams, CRO project managers, and investigator sites each have precisely scoped access — CROs see their study workstream, sites see their own site records. No over-sharing of confidential protocol or safety data across parties.

Single-tenant dedicated pharma cloud

Clinical trial data — protocols, patient safety data, CRO correspondence — is never co-mingled with other sponsors or industries. Dedicated storage and infrastructure meeting the data security requirements applicable to clinical research.

Long-term archive and data retention

Trial records retained for the regulatory-required archive period — 15 years post-marketing authorisation for clinical trial records — with automated backup, encryption, and access-logged retrieval meeting GCP and regulatory archive requirements.

ICH E6(R2) oversight evidence

The governed action register, RFI log, and real-time dashboard produce an audit-ready body of evidence demonstrating active sponsor oversight of outsourced CRO activities — meeting the ICH E6(R2) requirement that inspectors specifically review during GCP inspections.

Reports & Dashboards

Real-time visibility from site-level actions to programme-level oversight

goPLIMS gives clinical operations managers, CMOs, and CRO oversight teams the trial visibility they need — and generates the inspection-ready records that regulators require — automatically, as the trial runs.

Trial Programme Dashboard

Live status across all sites — activation progress, enrolment against target, open actions, and outstanding CRO deliverables — visible to the sponsor oversight team in real time without CRO status calls.

Site Activation Status Report

Per-site activation milestones — ethics approval, regulatory submission, site agreement, SIV completion, first patient enrolled — with RAG status and days-to-first-patient projection updated automatically.

CRO & Vendor Query Register

All open and resolved RFIs between sponsor and CRO — with query date, owner, response deadline, and resolution record — producing the oversight evidence trail required by ICH E6(R2) for GCP inspections.

Protocol Amendment Register

All protocol amendments — version, rationale, approval status per regulatory authority, and site implementation tracking — in one governed register with a complete version history and e-signature record for each amendment.

Trial Milestone Status Report

Planned vs. actual milestone progress across all trial phases — site activation, FPI, LPI, database lock, CSR approval — giving the CMO and programme leadership a predictive view of trial timeline against submission target.

Clinical Study Archive Export

A complete, structured export of all trial records — TMF documents, amendments, CRO correspondence, oversight actions, and decisions — formatted as a GCP-compliant archive package for regulatory submission and long-term retention.
Why goPLIMS

Purpose-built for clinical operations governance — not generic project management

Most project management tools used in clinical operations were not designed for GCP compliance, TMF governance, or CRO oversight evidence. goPLIMS was — with ICH E6(R2) compliant records and sponsor oversight governance built into every module from the ground up.

Single dedicated cloud

Clinical trial data never shared with other sponsors or industries. Dedicated infrastructure meeting the data security and integrity requirements applicable to clinical research records and TMF archives.

GCP & 21 CFR Part 11

ICH E6(R2) GCP and 21 CFR Part 11 compliance built into every module — TMF governance, CRO oversight evidence, protocol amendment records, and CSR approval audit trails all built-in from day one.

Connected to R&D & tech transfer

Clinical trial decisions and documents connect directly to the R&D development record and tech transfer programme on the same platform — no handoff package needed when Phase III concludes and commercialisation begins.

Live in days, not months

No lengthy implementation. Configured to your trial structure — study phases, site countries, CRO roles, document types — and productive from day one with onboarding support for your clinical operations team.

Frequently asked questions

Your questions answered.

Every CRO deliverable and query is managed as a governed action or RFI in goPLIMS — assigned to an owner, given a deadline, tracked in real time, and resolved with a complete audit trail. The sponsor oversight team has a live view of all CRO actions and open queries across all study sites without relying on email status updates, meeting the ICH E6(R2) requirement for effective oversight of outsourced trial activities.

Yes. goPLIMS supports controlled external access with role-based permissions. CROs can access site activation actions and query registers for the studies they manage. Investigator sites can receive and respond to specific site-level action items. All external access is restricted to the workstreams and documents relevant to each partner — with a complete audit trail on every action.

goPLIMS supports GCP compliance through governed document management for the Trial Master File, electronic signatures on protocol approvals and amendments, a complete audit trail on all trial actions and decisions, and structured CRO oversight via RFI-M. Every protocol version, amendment, informed consent document, and site correspondence is version-controlled with a tamper-evident record meeting ICH E6(R2) electronic record requirements.

Yes. Protocol amendments are managed as governed document revisions in EDocM — with version control, review chain, and e-signed approval — and the amendment submission to each IRB or ethics committee is tracked as an action in ActionR with submission date, approval receipt, and implementation milestone governed and visible on the trial dashboard.

goPLIMS governs trial close-out as a structured workstream — site close-out actions in ActionR, final site correspondence in EDocM, CSR approval in EDocM with ESignM, and close-out decisions captured in DecisionM. The trial archive export from goPLIMS provides a complete, e-signed, tamper-evident record of the trial meeting the archive requirements under 21 CFR Part 11 and ICH E6(R2).

Ready to govern your clinical trial programme from protocol through close-out?

See how goPLIMS replaces email chains with CROs and spreadsheet site trackers with one GCP-compliant, governed clinical operations platform.

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